PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S03984.30
Common NameJCGZ_18690, LOC105641744
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family bHLH
Protein Properties Length: 203aa    MW: 22906.6 Da    PI: 10.3714
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S03984.30genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.8e-114389455
                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                   +h+e+Er+RR riN+ +++Lr+ lP++      K +Ka++L ++++ +k+L+
  Jcr4S03984.30 43 KHKEAERKRRVRINNQYAKLRSFLPNL-----IKRNKASVLAETIQRVKELE 89
                   6*************************9.....69************999985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.6753988IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.76E-84293No hitNo description
SuperFamilySSF474593.14E-1343101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-84389IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-124397IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-74594IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
YHNPGTCSKK MNLHSSESFM DALNYRSSLS MSKGEAKVVS ALKHKEAERK RRVRINNQYA  60
KLRSFLPNLI KRNKASVLAE TIQRVKELEN TVSELKEIYG FGLFPGGKET LSVEYSKRQG  120
QRLVKVMFSC DDKEKLMSDI ERAVMSGKGK VVRVEIVAVC GWTKSVLWVQ GINGNRQLDV  180
LRTALDAIID PIMPNSKPAT CRD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14253KHKEAERKRRVR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012081730.11e-141PREDICTED: transcription factor bHLH131-like
TrEMBLA0A067KBZ31e-141A0A067KBZ3_JATCU; Uncharacterized protein
STRINGPOPTR_0007s14360.12e-59(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126113032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.17e-33bHLH family protein
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]